reco_tool::PeakFitterMrqdt Class Reference

Inheritance diagram for reco_tool::PeakFitterMrqdt:

Public Member Functions
	PeakFitterMrqdt (const fhicl::ParameterSet &pset)
void	findPeakParameters (const std::vector< float > &, const ICandidateHitFinder::HitCandidateVec &, PeakParamsVec &, double &, int &) const override

Private Types
using	PeakParamsVec = std::vector< PeakFitParams_t >

Private Attributes
const double	fMinWidth
const double	fMaxWidthMult
const double	fPeakRange
const double	fAmpRange
std::unique_ptr< gshf::MarqFitAlg >	fMarqFitAlg
const geo::GeometryCore *	fGeometry = lar::providerFrom<geo::Geometry>()

Detailed Description

Definition at line 19 of file PeakFitterMrqdt_tool.cc.

Member Typedef Documentation

using reco_tool::IPeakFitter::PeakParamsVec = std::vector<PeakFitParams_t>

inherited

Definition at line 34 of file IPeakFitter.h.

Constructor & Destructor Documentation

reco_tool::PeakFitterMrqdt::PeakFitterMrqdt ( const fhicl::ParameterSet &  pset )

explicit

Definition at line 44 of file PeakFitterMrqdt_tool.cc.

    : fMinWidth(pset.get<double>("MinWidth", 0.5))
    , fMaxWidthMult(pset.get<double>("MaxWidthMult", 3.))
    , fPeakRange(pset.get<double>("PeakRangeFact", 2.))
    , fAmpRange(pset.get<double>("PeakAmpRange", 2.))
  {}

Member Function Documentation

void reco_tool::PeakFitterMrqdt::findPeakParameters ( const std::vector< float > &  signal, const ICandidateHitFinder::HitCandidateVec &  fhc_vec, PeakParamsVec &  mhpp_vec, double &  chi2PerNDF, int &  NDF  ) const

overridevirtual

Implements reco_tool::IPeakFitter.

Definition at line 53 of file PeakFitterMrqdt_tool.cc.

References util::abs(), DEFINE_ART_CLASS_TOOL, e, fAmpRange, fMarqFitAlg, fMaxWidthMult, fMinWidth, fPeakRange, reco_tool::IPeakFitter::PeakFitParams_t::peakAmplitude, reco_tool::IPeakFitter::PeakFitParams_t::peakAmplitudeError, reco_tool::IPeakFitter::PeakFitParams_t::peakCenter, reco_tool::IPeakFitter::PeakFitParams_t::peakCenterError, reco_tool::IPeakFitter::PeakFitParams_t::peakSigma, reco_tool::IPeakFitter::PeakFitParams_t::peakSigmaError, and y.

  {
    if (fhc_vec.empty()) return;

    const float chiCut = 1e-3;
    float lambda = 0.001; /* Marquardt damping parameter */
    float chiSqr = std::numeric_limits<float>::max(), dchiSqr = std::numeric_limits<float>::max();
    int nParams = 0;

    int startTime = fhc_vec.front().startTick;
    int endTime = fhc_vec.back().stopTick;

    int roiSize = endTime - startTime;

    // init to a large number in case the fit fails
    chi2PerNDF = chiSqr;

    std::vector<float> y(roiSize);
    std::vector<float> p(3 * fhc_vec.size());
    std::vector<float> plimmin(3 * fhc_vec.size());
    std::vector<float> plimmax(3 * fhc_vec.size());
    std::vector<float> perr(3 * fhc_vec.size());

    /* choose the fit function and set the parameters */
    nParams = 0;

    for (size_t ih = 0; ih < fhc_vec.size(); ih++) {
      float const peakMean =
        fhc_vec[ih].hitCenter - 0.5 - (float)startTime; //shift by 0.5 to account for bin width
      float const peakWidth = fhc_vec[ih].hitSigma;
      float const amplitude = fhc_vec[ih].hitHeight;
      float const meanLowLim = fmax(peakMean - fPeakRange * peakWidth, 0.);
      float const meanHiLim = fmin(peakMean + fPeakRange * peakWidth, (float)roiSize);
      p[0 + nParams] = amplitude;
      p[1 + nParams] = peakMean;
      p[2 + nParams] = peakWidth;

      plimmin[0 + nParams] = amplitude * 0.1;
      plimmin[1 + nParams] = meanLowLim;
      plimmin[2 + nParams] = std::max(fMinWidth, 0.1 * peakWidth);

      plimmax[0 + nParams] = amplitude * fAmpRange;
      plimmax[1 + nParams] = meanHiLim;
      plimmax[2 + nParams] = fMaxWidthMult * peakWidth;

      nParams += 3;
    }
    int fitResult = -1;

    for (size_t idx = 0; idx < size_t(roiSize); idx++) {
      y[idx] = signal[startTime + idx];
    }

    int trial = 0;
    lambda = -1.; /* initialize lambda on first call */
    do {
      fitResult = fMarqFitAlg->gshf::MarqFitAlg::mrqdtfit(
        lambda, &p[0], &plimmin[0], &plimmax[0], &y[0], nParams, roiSize, chiSqr, dchiSqr);
      trial++;
      if (fitResult || (trial > 100)) break;
    } while (fabs(dchiSqr) >= chiCut);

    if (!fitResult) {
      int fitResult2 =
        fMarqFitAlg->gshf::MarqFitAlg::cal_perr(&p[0], &y[0], nParams, roiSize, &perr[0]);
      if (!fitResult2) {
        NDF = roiSize - nParams;
        chi2PerNDF = chiSqr / NDF;
        int parIdx = 0;
        for (size_t i = 0; i < fhc_vec.size(); i++) {

          /* stand alone method
          mhpp_vec[i].peakAmplitude      = p[parIdx + 0];
          mhpp_vec[i].peakAmplitudeError = perr[parIdx + 0];
          mhpp_vec[i].peakCenter         = p[parIdx + 1] + 0.5 + float(startTime);
          mhpp_vec[i].peakCenterError    = perr[parIdx + 1];
          mhpp_vec[i].peakSigma          = p[parIdx + 2];
          mhpp_vec[i].peakSigmaError     = perr[parIdx + 2];
          */

          PeakFitParams_t mhpp;
          mhpp.peakAmplitude = p[parIdx + 0];
          mhpp.peakAmplitudeError = perr[parIdx + 0];
          mhpp.peakCenter =
            p[parIdx + 1] + 0.5 + float(startTime); //shift by 0.5 to account for bin width
          mhpp.peakCenterError = perr[parIdx + 1];
          mhpp.peakSigma = std::abs(p[parIdx + 2]);
          mhpp.peakSigmaError = perr[parIdx + 2];

          mhpp_vec.emplace_back(mhpp);

          parIdx += 3;
        }

        //      fitStat=0;
      }
    }
    return;
  }

Member Data Documentation

const double reco_tool::PeakFitterMrqdt::fAmpRange

private

Definition at line 34 of file PeakFitterMrqdt_tool.cc.

Referenced by findPeakParameters().

const geo::GeometryCore* reco_tool::PeakFitterMrqdt::fGeometry = lar::providerFrom<geo::Geometry>()

private

Definition at line 38 of file PeakFitterMrqdt_tool.cc.

std::unique_ptr<gshf::MarqFitAlg> reco_tool::PeakFitterMrqdt::fMarqFitAlg

private

Definition at line 36 of file PeakFitterMrqdt_tool.cc.

Referenced by findPeakParameters().

const double reco_tool::PeakFitterMrqdt::fMaxWidthMult

private

Definition at line 32 of file PeakFitterMrqdt_tool.cc.

Referenced by findPeakParameters().

const double reco_tool::PeakFitterMrqdt::fMinWidth

private

Definition at line 31 of file PeakFitterMrqdt_tool.cc.

Referenced by findPeakParameters().

const double reco_tool::PeakFitterMrqdt::fPeakRange

private

Definition at line 33 of file PeakFitterMrqdt_tool.cc.

Referenced by findPeakParameters().

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The documentation for this class was generated from the following file:

• larreco/v09_25_00/source/larreco/HitFinder/HitFinderTools/PeakFitterMrqdt_tool.cc