lar::example::SpacePointIsolationAlg Class Reference

Algorithm to detect isolated space points. More...

#include "SpacePointIsolationAlg.h"

Classes
struct	Config
	Algorithm configuration. More...

Public Types
using	Coord_t = std::decay_t< decltype(recob::SpacePoint().XYZ()[0])>
	Type of coordinate in recob::SpacePoint (double in LArSoft 5) More...

Public Member Functions
template<typename PointIter >
std::vector< size_t >	removeIsolatedPoints (PointIter begin, PointIter end) const
	Returns the set of reconstructed 3D points that are not isolated. More...
std::vector< size_t >	removeIsolatedPoints (std::vector< recob::SpacePoint > const &points) const
	Returns the set of reconstructed 3D points that are not isolated. More...
Construction and configuration
	SpacePointIsolationAlg (Config const &config)
	Constructor with configuration validation. More...
	SpacePointIsolationAlg (fhicl::ParameterSet const &pset)
	Constructor with configuration validation. More...
Set up
void	setup (geo::GeometryCore const &geometry)
	Sets up the algorithm. More...

Private Types
using	PointIsolationAlg_t = PointIsolationAlg< Coord_t >
	Type of isolation algorithm. More...

Private Member Functions
void	initialize ()
	Initialises the algorithm with the current configuration and setup. More...
void	fillAlgConfigFromGeometry (PointIsolationAlg_t::Configuration_t &config)
	Detects the boundaries of the volume to be sorted from the geometry. More...

Private Attributes
geo::GeometryCore const *	geom = nullptr
	Pointer to the geometry to be used. More...
Coord_t	radius2
	square of isolation radius [cm^2] More...
std::unique_ptr< PointIsolationAlg_t >	isolationAlg
	the actual generic algorithm More...

Detailed Description

Algorithm to detect isolated space points.

See also

RemoveIsolatedSpacePoints example overview

This algorithm applies the isolation algorithm implemented in PointIsolationAlg to a collection of recob::SpacePoint objects.

Usage example

//
// preparation
//

// get the algorithm configuration; in art:
fhicl::ParameterSet config
  = pset.get<fhicl::ParameterSet>("isolation");

// get the geometry service provider; in art:
geo::GeometryCore const* geom = lar::providerFrom<geo::Geometry>();

// get the input data; in art:
std::vector<recob::SpacePoint> const& points
  = *(event.getValidHandle<std::vector<recob::SpacePoint>>("sps"));

//
// algorithm execution
//

// construct and configure 
lar::examples::SpacePointIsolationAlg algo(config);

// set up
// (might be needed again if geometry changed, e.g. between runs)
algo.Setup(*geom);

// execution
std::vector<size_t> nonIsolatedPointIndices
  = algo.removeIsolatedPoints(points);

//
// use of results
//

// e.g. create a collection of pointers to non-isolated points
std::vector<recob::SpacePoint const*> nonIsolatedPoints;
nonIsolatedPoints.reserve(nonIsolatedPointIndices.size());
recob::SpacePoint const* basePoint = &(points.front());
for (size_t index: nonIsolatedPointIndices)
  nonIsolatedPoints.push_back(basePoint + index);

Configuration parameters

• radius (real, mandatory): isolation radius [cm]

Definition at line 104 of file SpacePointIsolationAlg.h.

Member Typedef Documentation

using lar::example::SpacePointIsolationAlg::Coord_t = std::decay_t<decltype(recob::SpacePoint().XYZ()[0])>

Type of coordinate in recob::SpacePoint (double in LArSoft 5)

Definition at line 108 of file SpacePointIsolationAlg.h.

using lar::example::SpacePointIsolationAlg::PointIsolationAlg_t = PointIsolationAlg<Coord_t>

private

Type of isolation algorithm.

Definition at line 207 of file SpacePointIsolationAlg.h.

Constructor & Destructor Documentation

lar::example::SpacePointIsolationAlg::SpacePointIsolationAlg ( Config const &  config )

inline

Constructor with configuration validation.

Parameters

config

configuration parameter structure

For the configuration, see SpacePointIsolationAlg documentation.

Definition at line 134 of file SpacePointIsolationAlg.h.

        : radius2(cet::square(config.radius()))
        {}

lar::example::SpacePointIsolationAlg::SpacePointIsolationAlg ( fhicl::ParameterSet const &  pset )

inline

Constructor with configuration validation.

Parameters

pset	FHiCL configuration parameter set

See also

SpacePointIsolationAlg(Config const&)

Translates the parameter set into a configuration object and uses the validating constructor to initialise the object.

For the configuration, see SpacePointIsolationAlg documentation.

Definition at line 148 of file SpacePointIsolationAlg.h.

        : SpacePointIsolationAlg(fhicl::Table<Config>(pset, {})())
        {}

Member Function Documentation

void lar::example::SpacePointIsolationAlg::fillAlgConfigFromGeometry ( PointIsolationAlg_t::Configuration_t &  config )

private

Detects the boundaries of the volume to be sorted from the geometry.

Definition at line 51 of file SpacePointIsolationAlg.cxx.

References geo::GeometryCore::begin_TPC(), geo::GeometryCore::end_TPC(), geo::BoxBoundedGeo::ExtendToInclude(), geom, geo::BoxBoundedGeo::MaxX(), geo::BoxBoundedGeo::MaxY(), geo::BoxBoundedGeo::MaxZ(), geo::BoxBoundedGeo::MinX(), geo::BoxBoundedGeo::MinY(), geo::BoxBoundedGeo::MinZ(), lar::example::PointIsolationAlg< Coord >::Configuration_t::rangeX, lar::example::PointIsolationAlg< Coord >::Configuration_t::rangeY, and lar::example::PointIsolationAlg< Coord >::Configuration_t::rangeZ.

Referenced by initialize().

{
  // merge the volumes from all TPCs
  auto iTPC = geom->begin_TPC(), tpcend = geom->end_TPC();
  
  // a TPC is (also) a bounded box:
  geo::BoxBoundedGeo box = (geo::BoxBoundedGeo) *iTPC;
  
  while (++iTPC != tpcend) box.ExtendToInclude(*iTPC);
  
  // convert the box into the configuration structure
  config.rangeX = { box.MinX(), box.MaxX() };
  config.rangeY = { box.MinY(), box.MaxY() };
  config.rangeZ = { box.MinZ(), box.MaxZ() };
  
} // lar::example::SpacePointIsolationAlg::fillAlgConfigFromGeometry()

void lar::example::SpacePointIsolationAlg::initialize ( )

private

Initialises the algorithm with the current configuration and setup.

Definition at line 28 of file SpacePointIsolationAlg.cxx.

References e, fillAlgConfigFromGeometry(), isolationAlg, lar::example::PointIsolationAlg< Coord >::Configuration_t::radius2, radius2, and lar::example::PointIsolationAlg< Coord >::validateConfiguration().

                                                  {
  
  PointIsolationAlg_t::Configuration_t config;
  
  config.radius2 = radius2; // square of isolation radius [cm^2]
  fillAlgConfigFromGeometry(config);
  
  // proceed to validate the configuration we are going to use
  try {
    PointIsolationAlg_t::validateConfiguration(config);
  }
  catch (std::runtime_error const& e) {
    throw cet::exception("SpacePointIsolationAlg")
      << "Error in PointIsolationAlg configuration: " << e.what() << "\n";
  }
  
  if (isolationAlg) isolationAlg->reconfigure(config);
  else isolationAlg = std::make_unique<PointIsolationAlg_t>(config);
  
} // lar::example::SpacePointIsolationAlg::initialize()

template<typename PointIter >

std::vector<size_t> lar::example::SpacePointIsolationAlg::removeIsolatedPoints ( PointIter  begin, PointIter  end  ) const

inline

Returns the set of reconstructed 3D points that are not isolated.

Template Parameters

PointIter

random access iterator to a space point

Parameters

begin	iterator to the first point to be considered
end	iterator after the last point to be considered

Returns

a list of indices of non-isolated points in the input range

See also

PointIsolationAlg::removeIsolatedPoints(PointIter, PointIter) const

This method can use iterators from any collection of input space points.

Definition at line 183 of file SpacePointIsolationAlg.h.

References fhicl::detail::atom::value().

Referenced by lar::example::RemoveIsolatedSpacePoints::produce().

        {
          static_assert(
            std::is_base_of<recob::SpacePoint, std::decay_t<decltype(*begin)>>::value,
            "iterator does not point to recob::SpacePoint"
            );
          return isolationAlg->removeIsolatedPoints(begin, end);
        }

std::vector<size_t> lar::example::SpacePointIsolationAlg::removeIsolatedPoints ( std::vector< recob::SpacePoint > const &  points ) const

inline

Returns the set of reconstructed 3D points that are not isolated.

Parameters

points

list of the reconstructed space points

Returns

a list of indices of non-isolated points in the vector

See also

removeIsolatedPoints(PointIter, PointIter) const

Definition at line 200 of file SpacePointIsolationAlg.h.

        { return removeIsolatedPoints(points.begin(), points.end()); }

void lar::example::SpacePointIsolationAlg::setup ( geo::GeometryCore const &  geometry )

inline

Sets up the algorithm.

Parameters

geometry

the geometry service provider

Acquires the geometry description. This method must be called every time the geometry is changed.

Definition at line 164 of file SpacePointIsolationAlg.h.

Referenced by lar::example::RemoveIsolatedSpacePoints::produce().

        { geom = &geometry; initialize(); }

Member Data Documentation

geo::GeometryCore const* lar::example::SpacePointIsolationAlg::geom = nullptr

private

Pointer to the geometry to be used.

Definition at line 210 of file SpacePointIsolationAlg.h.

Referenced by fillAlgConfigFromGeometry().

std::unique_ptr<PointIsolationAlg_t> lar::example::SpacePointIsolationAlg::isolationAlg

private

the actual generic algorithm

Definition at line 215 of file SpacePointIsolationAlg.h.

Referenced by initialize().

Coord_t lar::example::SpacePointIsolationAlg::radius2

private

square of isolation radius [cm^2]

Definition at line 212 of file SpacePointIsolationAlg.h.

Referenced by initialize().

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The documentation for this class was generated from the following files:

• /cvmfs/larsoft.opensciencegrid.org/products/larexamples/v07_00_19/source/larexamples/Algorithms/RemoveIsolatedSpacePoints/SpacePointIsolationAlg.h
• /cvmfs/larsoft.opensciencegrid.org/products/larexamples/v07_00_19/source/larexamples/Algorithms/RemoveIsolatedSpacePoints/SpacePointIsolationAlg.cxx